Package: rsurvstat 0.1.4

Robert Challen

rsurvstat: Download Infectious Disease Data from 'SurvStat' (Robert Koch Institute)

Provides an interface to the 'SurvStat' web service from the Robert Koch Institute (<https://tools.rki.de/SurvStat/SurvStatWebService.svc>) allowing downloads of disease time series stratified by pathogen type and subtype, age, and geography from notifiable disease reports in Germany.

Authors:Robert Challen [aut, cre], Bristol Vaccine Centre [fnd, cph]

rsurvstat_0.1.4.tar.gz
rsurvstat_0.1.4.zip(r-4.7)rsurvstat_0.1.4.zip(r-4.6)rsurvstat_0.1.4.zip(r-4.5)
rsurvstat_0.1.4.tgz(r-4.6-any)rsurvstat_0.1.4.tgz(r-4.5-any)
rsurvstat_0.1.4.tar.gz(r-4.7-any)rsurvstat_0.1.4.tar.gz(r-4.6-any)
rsurvstat_0.1.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rsurvstat/json (API)

# Install 'rsurvstat' in R:

install.packages('rsurvstat', repos = c('https://bristol-vaccine-centre.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bristol-vaccine-centre/rsurvstat/issues

Pkgdown/docs site:https://bristol-vaccine-centre.github.io

Datasets:

BerlinMap - A Berlin outline 'sf' map
CountyKey71Map - The 'CountyKey71Map' dataset
FedStateKey71Map - The 'FedStateKey71Map' dataset.
NutsKey71Map - The 'NutsKey71Map' dataset

On CRAN:

4.40 score 6 scripts 196 downloads 9 exports 44 dependencies

Last updated from:57290a4215 (on 0.1.4). Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	151
source / vignettes	OK	217
linux-release-x86_64	OK	144
macos-release-arm64	OK	87
macos-oldrel-arm64	OK	106
windows-devel	OK	79
windows-release	OK	103
windows-oldrel	OK	102
wasm-release	OK	130

Exports:%>%age_groups cache_clear diseases fit_population get_snapshot get_timeseries infer_population set_cache_settings

Dependencies:askpass class classInt cli cpp11 curl DBI dplyr e1071 fs generics glue httr jsonlite KernSmooth lattice lifecycle locfit magrittr MASS mime openssl pillar pkgconfig proxy purrr R6 Rcpp rlang s2 sf stringi stringr sys tibble tidyr tidyselect units utf8 vctrs whisker withr wk xml2

Getting started

Introduction | Age stratification example | Geography | Disease subtype | Conclusion

Rendered fromrsurvstat.Rmdusingknitr::rmarkdown

Last update: 2026-01-06
Started: 2023-04-25

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
'SurvStat' age group list	age_groups
A Berlin outline 'sf' map	BerlinMap
Delete all cached 'SurvStat' requests	cache_clear
The 'CountyKey71Map' dataset	CountyKey71Map
'SurvStat' disease list	diseases
The 'FedStateKey71Map' dataset.	FedStateKey71Map
Infer and fit a population model from 'SurvStat' output	fit_population infer_population
Retrieve data from the 'SurvStat' web service relating to a single time period.	get_snapshot
Retrieve time series data from the 'SurvStat' web service.	get_timeseries
The 'NutsKey71Map' dataset	NutsKey71Map
Set options for the 'rsurvstat' cache	set_cache_settings